Next Generation Sequencing
Cancer Systems Biology Workshop
May 31, 2013
8:30am - 3:00pm, Munzer Auditorium
This workshop will provide an overview of NGS data acquisition and processing. No previous exposure to NGS studies required. Open and free to graduate students, postdoctoral fellows, and faculty.
Register Today!
Course director: Andrew Gentles, Ph.D.
For information, contact Anita Samantaray or Grace Kolar
PROGRAM
| 8:30AM - 9:00AM | Registration | Slides |
| 9:00AM - 9:45AM | Introduction – Overview of Next Generation Sequencing and Applications Hanlee Ji, Stanford Genome Technology Center |
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| 9:45AM - 10:30AM | Processing and Alignment of NGS Data Ben Passarelli, Director of Computing, Stanford Stem Cell Institute |
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| 10:30AM - 10:45AM | Break | |
| 10:45AM - 11:30AM | Variant Calling and Structural Variants from Exomes/WGS Ramesh Nair, Stanford CCSB |
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| 11:30AM - 12:15PM | RNA-seq – Expression Profiling and Fusion Genes Julia Salzman, Brown Lab |
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| 12:15PM - 1:30PM | Break | |
1:30PM - 2:15PM |
Examples of NGS Sequencing in Cancer Michael Green, Stanford CCSB |
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| 2:15PM - 3:00PM | Group Discussion & Questions Andrew Gentles, Stanford CCSB |
Sponsored by the Stanford Center for Cancer Systems Biology and the Cancer Biology Program.
